Job Description P27242 Confidence 96.11% Date Thu Jan 5 11:43:22 GMT 2012 Rank 20 Aligned Residues 297 % Identity 11% Template c3okaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.	.	.																																																				.	.	.	.
Query SS confidence											.	.	.																																																				.	.	.	.
Query Sequence		K	S	C	L	I	I	H	D	N	.	.	.	N	K	L	G	D	L	I	V	L	S	S	I	Y	R	E	L	Y	S	K	G	V	K	I	T	L	L	T	N	R	K	G	G	E	F	L	S	N	N	K	N	I	F	E	F	C	I	K	E	S	T	G	.	.	.	.	F	L	E	M	L	T	L	C	K	H	L	R	D
Query Conservation											.	.	.																																																				.	.	.	.
Alig confidence											.	.	.																																																				.	.	.	.
Template Conservation
Template Sequence		R	K	T	L	V	V	T	N	D	F	P	P	R	I	G	G	I	Q	S	Y	L	R	D	F	I	A	T	Q	D	P	E	S	I	V	V	F	A	S	T	Q	N	A	E	E	A	H	A	Y	D	K	T	L	D	Y	E	V	I	R	W	P	R	S	V	M	L	P	T	P	T	T	A	H	A	M	A	E	I	I	R	E
Template Known Secondary structure									S			T	T	S		S												T	S		G	G	G								S										T	T		S	S						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.																							.
Query SS confidence																																																			.	.	.	.	.	.	.	.																							.
Query Sequence		L	Q	F	D	I	V	L	D	P	F	E	T	M	P	S	F	K	H	S	L	I	L	S	S	L	K	D	S	Y	I	L	G	F	D	H	W	Y	K	R	Y	Y	S	F	Y	H	P	H	D	E	.	.	.	.	.	.	.	.	C	L	K	E	H	M	S	T	R	A	I	E	I	L	K	H	I	Y	G	E	G	K	.
Query Conservation																																																			.	.	.	.	.	.	.	.																							.
Alig confidence																																																			.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		R	E	I	D	N	V	W	F	G	A	A	A	P	L	A	L	M	A	G	T	A	K	Q	A	G	A	S	K	V	I	A	S	T	H	G	H	E	V	G	W	S	M	L	P	G	S	R	Q	S	L	R	K	I	G	T	E	V	D	V	L	T	Y	I	S	Q	Y	T	L	R	R	F	K	S	A	F	G	S	H	P	T
Template Known Secondary structure		T	T		S					S	S		T	T	G	G	G	G							T	T		S								S		S	S	S	T	T			T	T													S					S									T	T	T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
									185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	S	T	N	Y	D	L	H	L	P	V	D	V	E	D	K	I	K	E	F	I	G	D	T	R	I	V	I	I	N	P	L	G	A	K	K	I	C	R	L	T	F	E	Q	I	K	V	I	Y	Q	E	V	K	T	H	F	E	N	Y	R	I	I	F	T	G	L	P	Q	D	L	L	T	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	H	L	P	S	G	V	D	V	K	R	F	T	P	A	T	P	E	D	K	S	A	T	R	K	K	L	G	F	T	D	T	T	P	V	I	A	C	N	S	R	L	V	P	R	K	G	Q	D	S	L	I	K	A	M	P	Q	V	I	A	A	R	P	D	A	Q	L	L	I	V	G	S	G	R	Y	E	S	T	L
Template Known Secondary structure									B		T	T	T	S																T			T	T								S		S	S	G	G	G																	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		258	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.													.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	L	.	.	.	.	.	.	E	I	E	T	L	P	F	D	E	F	I	Y	T	V	A	L	T	K	Y	S	D	F	V	I	S	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	H	I	A	A	A	Y	H	K	P	T	L	A	F	Y	P	N	S	R	T	P	E	Y	P	S	H	L	I	W
Query Conservation					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		R	R	L	A	T	D	V	S	Q	N	V	K	F	L	G	R	L	E	Y	Q	D	M	I	N	T	L	A	A	A	D	I	F	A	M	P	A	R	T	R	G	G	G	L	D	V	E	G	L	G	I	V	Y	L	E	A	Q	A	C	G	V	P	V	I	A	G	T	S	G	G	A	P	E	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	G	G	G	G	G	G						S														S									B	G	G	G	T	B				S										T	T							S	S	T	T	G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	N	H	H	K	S	I	Q	I	V	S	P	T	Y	T	V	K	D	I	D	T	E	T	L	T	N	S	V	K	R	L	S
Query Conservation
Alig confidence		.														.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.
Template Sequence		.	T	V	T	P	A	T	G	L	V	V	E	G	S	.	.	.	.	.	.	D	V	D	K	L	S	E	L	L	I	E	L	L
Template Known Secondary structure		.	G			T	T	T						T	T	.	.	.	.	.	.
Template Predicted Secondary structure		.														.	.	.	.	.	.
Template SS confidence
			317	.	.	320	.	.	.	.	.	.	.	.	.							330	.	.	.	.	.	.	.	.	.	340	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions