Job Description P27242 Confidence 76.72% Date Thu Jan 5 11:43:22 GMT 2012 Rank 44 Aligned Residues 278 % Identity 13% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.
Predicted Secondary structure																.	.	.	.	.																																					.																		.	.
Query SS confidence																.	.	.	.	.																																					.																		.	.
Query Sequence		M	R	L	G	T	F	H	K	K	K	R	F	Y	I	.	.	.	.	.	N	K	I	K	I	N	F	L	S	F	L	F	R	N	K	I	N	N	Q	I	T	D	P	A	Q	V	K	S	C	L	I	I	H	D	N	N	.	K	L	G	D	L	I	V	L	S	S	I	Y	R	E	L	Y	S	.	.	K	G	V	K	I
Query Conservation																.	.	.	.	.																																					.																		.	.
Alig confidence																.	.	.	.	.																.	.	.	.	.	.																.										.	.							.	.
Template Conservation																																				.	.	.	.	.	.																										.	.
Template Sequence		F	K	V	N	Q	F	R	K	T	L	R	H	V	K	N	I	V	L	R	R	K	N	K	E	R	S	L	Y	D	L	T	D	K	E	.	.	.	.	.	.	D	N	V	K	P	K	T	I	V	F	E	S	F	G	G	K	N	Y	S	D	S	P	K	Y	I	.	.	Y	E	Y	M	Q	K	Y	Y	P	N	Y	R	Y
Template Known Secondary structure																			T	T		T	T												G	.	.	.	.	.	.	G	G										B	G	G	G	T	B	S								.	.									T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.																										.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.							.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	T	N	R	K	G	G	E	F	L	S	N	N	K	N	I	F	E	F	C	I	K	E	S	T	G	F	L	E	M	L	T	L	C	K	H	L	R	D	L	Q	F	D	I	V	L	D	P	F	E	T	M	P	S	F	K	H	S	L	I	L	S	S	L	K	D	S	Y	I	L	G	F	D	H	W	Y	K	R
Query Conservation
Alig confidence																				.	.	.	.	.															.	.	.	.	.	.													.	.	.	.	.
Template Conservation																				.	.	.	.	.															.	.	.	.	.	.													.	.	.	.	.
Template Sequence		I	W	S	F	K	N	P	D	K	N	V	V	P	G	S	A	E	K	.	.	.	.	.	V	K	R	N	S	A	E	Y	Y	Q	A	Y	S	E	.	.	.	.	.	.	A	S	H	W	V	S	N	A	R	T	P	L	.	.	.	.	.	Y	L	N	K	K	E	N	Q	T	Y	I	Q	T	W	H	G	T	P	L	K
Template Known Secondary structure						S	S	G	G	G					S	S				.	.	.	.	.			T	T	S										.	.	.	.	.	.							S	S				T	.	.	.	.	.	T	S				T	T	S							S				S	B
Template Predicted Secondary structure																				.	.	.	.	.															.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.						.	.	.	.	.	.	410	.	.	.	.	.	.	.							.	.	420	.	.	.	.	.	.	.	.	.						430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																															180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	S	F	Y	H	P	H	D	E	C	L	K	E	H	M	S	T	R	A	I	E	I	L	K	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	E	G	K	F	S	T	N	Y	D	L	H	L	P	V	D	V	E	D	K	I	K
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	A	N	D	M	K	V	V	R	M	P	G	T	T	T	P	K	Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R	S	A	F	W	M	D	E	E	R	I	L	E	I	G	Y	P	R	N	D	V	L	V	N	R	A	N	D	Q	E	Y	L	D	E	I	R
Template Known Secondary structure				G	G	G							T	T															T	T		S					S	S											T	T			G	G	G				S			G	G	G						S	T	T
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		203	.	.	.				.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure						.	.	.											.	.	.	.																																											.	.
Query SS confidence						.	.	.											.	.	.	.																																											.	.
Query Sequence		E	F	I	G	.	.	.	D	T	R	I	V	I	I	N	P	L	.	.	.	.	G	A	K	K	I	C	R	L	T	F	E	Q	I	K	V	I	Y	Q	E	V	K	T	H	F	E	N	Y	R	I	I	F	T	G	L	P	Q	D	L	L	T	I	P	.	.	I	L	E	I	E	T	L	P	F	D	E	F	I	Y	T
Query Conservation						.	.	.											.	.	.	.																																											.	.
Alig confidence						.	.	.											.	.	.	.																																											.	.
Template Conservation
Template Sequence		T	H	L	N	L	P	S	D	K	K	V	I	M	Y	A	P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G	D	D	Y	V	I	L	L	R	M	A	Y	L	I	S	N	A	L	D	L	S	G	Y	E	N	F	A	I	D	V	S	N	Y	N	D	V
Template Known Secondary structure				T	T			S	S												G	G	G			G	G	G	S	S					T	T										T	T	T													T	T				T	T		T	T	T					T	T		S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	T	K	Y	S	D	F	V	I	S	V	D	T	A	L	V	H	I	A	A	A	Y	H	K	P	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	L	F	L	I	S	D	C	L	I	T	D	Y	S	S	V	M	F	D	Y	G	I	L	K	R	P	Q	F
Template Known Secondary structure							T		S					S	S		T	T					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions