Job Description P27242 Confidence 97.88% Date Thu Jan 5 11:43:22 GMT 2012 Rank 9 Aligned Residues 243 % Identity 13% Template c3hbmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni Resolution 1.80 Å

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		41	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		K	S	C	L	I	I	H	D	N	N	.	.	.	K	L	G	D	L	I	V	L	S	S	I	Y	R	E	L	Y	S	K	G	V	K	I	T	L	L	T	N	R	K	G	G	E	F	L	S	N	N	K	N	I	F	E	F	C	I	K	E	S	T	G	F	L	E	M	L	T	L	C	K	H	L	R	D	L	Q	F	D
Query Conservation												.	.	.
Alig confidence												.	.	.																		.	.	.	.																		.	.																				.	.	.
Template Conservation																																.	.	.	.																		.	.																				.	.	.
Template Sequence		X	K	V	L	F	R	S	D	S	S	S	Q	I	G	F	G	H	I	K	R	D	L	V	L	A	K	Q	Y	S	D	.	.	.	.	V	S	F	A	C	L	P	L	E	G	S	L	I	D	E	I	P	.	.	Y	P	V	Y	E	L	S	S	E	S	I	Y	E	L	I	N	L	I	K	.	.	.	E	E	K	F	E
Template Known Secondary structure											B	T	T	T	B	S											T	T		S	S	.	.	.	.									T	T			G	G	G			.	.	S						S	S	S											.	.	.			T		S
Template Predicted Secondary structure																																.	.	.	.																		.	.																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	D	P	F	E	T	M	P	S	F	K	H	S	L	I	L	S	S	L	K	D	S	Y	I	L	G	F	D	H	W	Y	K	R	Y	Y	S	F	Y	H	P	H	D	E	C	L	K	E	H	M	S	T	R	A	I	E	I	L	K	H	I	Y	G	E	G	K	F	S	T	N	Y	D	L	H	L	P	V	D	V
Query Conservation
Alig confidence																													.																						.	.	.	.	.
Template Conservation																													.																						.	.	.	.	.
Template Sequence		L	L	I	I	D	H	Y	G	I	S	V	D	D	E	K	L	I	K	L	E	T	G	V	K	I	L	S	.	F	D	D	E	I	K	P	H	H	C	D	I	L	L	N	V	N	A	Y	A	K	.	.	.	.	.	A	S	D	Y	E	G	L	V	P	K	C	E	V	R	C	G	F	S	Y	A	L	I	R	E	E	F
Template Known Secondary structure								T	T																				.			S	S							S						S	T	T			.	.	.	.	.	G	G	G	G	T	T	T									S	G	G	G
Template Predicted Secondary structure																													.																						.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		E	D	K	I	K	E	F	I	G	D	T	R	I	V	I	I	N	P	L	G	A	K	K	I	C	R	L	T	F	E	Q	I	K	V	I	Y	Q	E	V	K	T	H	F	E	N	Y	R	I	I	F	T	G	L	P	Q	D	L	L	T	I	P	I	L	.	.	.	E	I	E	T	L	P	F	D	E	F	I	Y	T	V
Query Conservation																																																																	.	.	.
Alig confidence																											.	.	.	.	.														.																				.	.	.
Template Conservation																											.	.	.	.	.														.
Template Sequence		Y	Q	E	A	K	E	N	R	K	K	K	Y	D	F	F	I	C	X	G	G	T	D	I	K	N	.	.	.	.	.	L	S	L	Q	I	A	S	E	L	P	K	T	K	.	I	I	S	I	A	T	S	S	S	N	P	N	L	K	K	L	Q	K	F	A	K	L	H	N	N	I	R	L	F	I	D	H	E	N	I	A
Template Known Secondary structure					T	T															S			T	T		.	.	.	.	.									S		T	T	S	.								T	T		T	T										T		S	S						S		S
Template Predicted Secondary structure																											.	.	.	.	.														.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	K	Y	S	D	F	V	I	S	V	D	T	A	L	V	H	I	A	A	A	Y	H	K	P	T	L	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	X	N	E	S	N	K	L	I	I	S	A	S	S	L	V	N	E	A	L	L	L	K	A	N	F	K	A	I
Template Known Secondary structure						T								S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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