Job Description P27242 Confidence 97.09% Date Thu Jan 5 11:43:22 GMT 2012 Rank 13 Aligned Residues 290 % Identity 9% Template c2vsnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation Resolution 2.75 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.							.	.	.	80	.
Predicted Secondary structure																																																											.	.	.										.	.	.	.	.	.
Query SS confidence																																																											.	.	.										.	.	.	.	.	.
Query Sequence		R	F	Y	I	N	K	I	K	I	N	F	L	S	F	L	F	R	N	K	I	N	N	Q	I	T	D	P	A	Q	V	K	S	C	L	I	I	H	D	N	N	K	L	G	D	L	I	V	L	S	S	I	Y	R	E	L	Y	S	.	.	.	K	G	V	K	I	T	L	L	T	.	.	.	.	.	.	N	R	K	G	G
Query Conservation																																																											.	.	.										.	.	.	.	.	.
Alig confidence																																																											.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	E	Q	L	A	C	A	R	T	R	A	Q	A	I	A	A	S	V	R	P	L	A	P	T	R	V	R	S	K	G	P	L	R	V	G	F	V	S	N	G	F	G	A	H	P	T	G	L	L	T	V	A	L	F	E	A	L	Q	R	R	Q	P	D	L	Q	M	H	L	F	A	T	S	G	D	D	G	S	T	L
Template Known Secondary structure																			T											S	S	S	S								S		S	S	S	S																		T	T								S	S				S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	L	S	N	N	K	N	I	F	E	F	C	I	K	E	S	T	G	F	L	E	M	L	T	L	C	K	H	L	R	D	L	Q	F	D	I	V	L	D	P	F	E	T	M	P	S	F	K	H	S	L	I	L	S	S	L	K	D	S	Y	I	L	G	F	D	H	W	Y	K	R	Y	Y	S	F	Y	H	P	H	D
Query Conservation
Alig confidence						.	.																	.	.	.
Template Conservation						.	.																	.	.	.
Template Sequence		R	T	R	L	.	.	A	Q	A	S	T	L	H	D	V	T	A	L	G	H	L	A	.	.	.	T	A	K	H	I	R	H	H	G	I	D	L	L	F	D	L	A	G	W	G	G	G	G	R	P	E	V	F	A	L	R	P	A	P	V	Q	V	N	W	L	A	Y	P	G	T	S	G	A	P	W	M	D	Y	V	L
Template Known Secondary structure						.	.		T	T	S						T	T	S					.	.	.								T	T		S					S	S		S	S	S	S								T			S	S						S	S	S	S	S					T	T
Template Predicted Secondary structure						.	.																	.	.	.
Template SS confidence
		254	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	L	K	E	H	M	S	T	R	A	I	E	I	L	K	H	I	Y	G	E	G	K	F	S	T	N	Y	D	L	H	L	P	V	D	V	E	D	K	I	K	E	F	I	G	D	T	R	I	V	I	I	N	P	L	G	A	K	K	I	C	R	L	T	F	E	Q	I	K	V	I	Y	Q	E	V	K	T	H	F	E
Query Conservation
Alig confidence																																																										.						.	.
Template Conservation																																																										.						.	.
Template Sequence		G	D	A	F	A	L	P	P	A	L	E	P	F	Y	S	E	H	V	L	R	L	Q	G	A	F	Q	P	S	D	T	S	R	V	V	A	E	P	P	S	R	T	Q	C	G	L	P	E	Q	G	V	V	L	C	C	F	N	.	N	S	Y	K	L	.	.	N	P	Q	S	M	A	R	M	L	A	V	L	R	E	V	P
Template Known Secondary structure				T	T	T	S		G	G	G	G	G	G		S	S						S	S		S					T	T									T	G	G	G	T			S	S	S								.		G	G	G		.	.															S	T
Template Predicted Secondary structure																																																										.						.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																											.	.										.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																											.	.										.	.
Query Sequence		N	Y	R	I	I	F	T	G	L	P	Q	D	L	L	T	I	P	.	.	.	.	.	.	.	.	.	.	I	L	E	I	E	T	L	P	F	D	E	F	I	Y	T	V	A	L	T	K	Y	S	D	F	V	I	.	.	S	V	D	T	A	L	V	H	I	.	.	A	A	A	Y	H	K	P	T	L	A	F	Y	P	N
Query Conservation																			.	.	.	.	.	.	.	.	.	.																											.	.										.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																											.	.										.	.
Template Conservation
Template Sequence		D	S	V	L	W	L	L	S	G	P	G	E	A	D	A	R	L	R	A	F	A	H	A	Q	G	V	D	A	Q	R	L	V	F	M	P	K	L	P	H	P	Q	Y	L	A	R	Y	R	H	A	D	L	F	L	D	T	H	P	Y	N	A	H	T	T	A	S	D	A	L	W	T	G	C	P	V	L	T	T	P	G	E
Template Known Secondary structure		T									S	T	T												T	T	S		G	G	G																G	G	G		S						S	S	S			S										T					B				S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		308
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		486

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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