 |
Job Description | P25552 | Confidence | 93.44% | Date | Thu Jan 5 11:42:09 GMT 2012 |
Rank | 78 | Aligned Residues | 96 |
% Identity | 20% | Template | c3m1tA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative phosphohydrolase; |
PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution
|
Resolution | 1.62 Å |
|
 |
  |   |
324 | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | Q | A | Q | R | V | A | K | V | A | A | N | F | F | D | Q | V | E | N | E | W | H | L | E | A | I | S | R | D | L | L | I | S | A | C | Q | L | H | E | I | G | L | S | V | D | F | K | Q | A | P | Q | H | A | A | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | R | N | L | D | L | P | G | F | T | P | A |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
Template Sequence |   |
W | G | N | T | F | E | V | A | I | I | C | Q | E | L | A | K | R | L | G | T | . |
. |
. |
. |
. |
. |
. |
L | P | E | E | A | F | T | C | G | I | L | H | S | I | G | E | L | L | I | V | N | G | D | P | A | V | A | A | T | I | S | A | A | V | A | D | G | A | D | R | N | L | X | E | K | E | L | L | G | Y | D | N | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | S | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
393 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | L | A | T | L | L | L | N | Q | T | N | P | V | D | L | S | S | L | H | Q | Q | N | A | V | P | P | R | V | A | E | Q | L | C | R | L | L | R | L | A | I | I | F |
Query Conservation |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
E | I | G | A | L | L | A | Q | S | W | K | F | T | P | H | L | V | K | G | I | Q | F | Q | N | H | P | K | S | A | E | P | Y | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | A | G | X | L | A | X | A | K | Q | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T | T | T |
| G | G | G |
| S | S |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|