Job Description P25552 Confidence 97.68% Date Thu Jan 5 11:42:09 GMT 2012 Rank 33 Aligned Residues 266 % Identity 18% Template c3iucC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	S	T	S	S	L	Y	A	A	I	D	L	G	S	N	S	F	H	M	L	V	V	R	E	V	A	G	S	I	Q	T	L	T	R	I	.	.	.	.	K	R	K	V	R	L	A	A	G	L	N	S	E	N	A	L	S	N	E	A	M	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																		.	.											.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																		.	.
Template Sequence		M	D	V	G	T	.	.	V	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	K	.	.	N	G	R	V	E	I	I	A	N	D	Q	G	N	R	I	T	P	S	Y	V	A	F	T	P	E	G	E	R	L	I	G	D	A	A	K	N	Q	L	T	S	N	P	E	N	T	V	F	D	A	K	R	L	I	G
Template Known Secondary structure		S	S	B			.	.								S	S									.	.	T	T								T	T	S		S	S									T	T	S					T					T	T	T	T	T		S	T	T					G	G	G	T	T	T
Template Predicted Secondary structure							.	.																		.	.
Template SS confidence
		25	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																																															60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	Q	C	L	R	L	F	A	E	R	L	Q	.	D	I	P	P	S	Q	I	R	V	V	A	T	A	T	L	R	L	A	V	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		R	T	W	N	D	P	S	V	Q	Q	D	I	K	F	L	P	F	K	V	V	E	K	K	T	K	P	Y	I	Q	V	D	I	G	G	G	Q	T	K	T	F	A	P	E	E	I	S	A	M	V	L	T	K	M	K	E	T	A	E	A	Y	L	G	K	K	V	T	H	A	V	V	T	V	P	A	Y	F	N	D	A	Q
Template Known Secondary structure				T	T									T	T		S	S						T	T									S	T	T																											T	S	B										T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		G	D	F	I	A	K	A	Q	E	I	L	G	C	P	V	Q	V	I	S	G	E	E	E	A	R	L	I	Y	Q	G	V	A	H	T	T	G	G	A	D	Q	R	L	V	V	D	I	G	G	A	S	T	E	L	V	T	G	T	G	A	Q	.	.	.	.	.	T	T	S	L	F	S	L	S	M	G	C	V	T	W	L
Query Conservation																																																														.	.	.	.	.
Alig confidence																														.	.	.																														.	.	.	.	.
Template Conservation																														.	.	.
Template Sequence		R	Q	A	T	K	D	A	G	T	I	A	G	L	N	V	M	R	I	I	N	E	P	T	A	A	A	I	A	.	.	.	Y	G	L	D	K	G	E	K	N	I	L	V	F	D	L	G	G	G	T	F	D	V	S	L	L	T	I	D	N	G	V	F	E	V	V	A	T	N	G	D	T	H	L	G	G	E	D	F	D
Template Known Secondary structure													T																	.	.	.	T	T	T	T													S	S											T	T											T	T		S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		169	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		E	R	Y	F	.	.	.	.	.	.	.	.	A	D	R	N	L	G	Q	E	N	F	D	A	A	E	K	A	A	R	E	V	L	R	P	V	A	D	E	L	R	Y	H	G	W	K	V	C	V	G	A	S	G	T	V	Q	A	L	Q	E	I	M	M	A	Q	G	M	D	E	R	I	T	L	E	K	L	Q	Q	L	K
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		Q	R	V	M	E	H	F	I	K	L	Y	K	K	K	T	G	K	D	V	R	K	D	N	R	A	V	Q	K	L	R	R	E	V	E	K	A	K	R	A	L	S	S	Q	H	Q	A	R	I	E	I	E	S	F	Y	.	.	.	.	.	.	.	.	E	G	E	D	F	S	E	T	L	T	R	A	K	F	E	E	L	N
Template Known Secondary structure																	S				T	T																				T	T	S	S											.	.	.	.	.	.	.	.	T	T																T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		Q	R	A	I	H	C	G	R	L	E	E	L	E	I	D	G	L	T	L	E	R	A	L	V	F	P	S	G	L	A	I	L	I	A	I	F	T	E	L	N	.	.	.	.	.	I	Q	C	M	T	L	A	G	G	A	L	R	E	G	L	V	Y	G	M	L	H	L
Query Conservation																																										.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	F	R	S	T	M	K	P	V	Q	K	V	L	E	D	S	D	L	K	K	S	D	I	D	E	I	V	L	V	G	G	S	T	R	I	P	K	I	Q	Q	L	V	K	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											T	T			G	G	G								S	G	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332																						.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions