Job Description P25552 Confidence 86.08% Date Thu Jan 5 11:42:09 GMT 2012 Rank 102 Aligned Residues 247 % Identity 13% Template c3htvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	S	L	Y	A	A	I	D	L	G	S	N	S	F	H	M	L	V	V	R	E	V	A	G	S	I	Q	T	L	T	R	I	K	R	K	V	R	L	A	A	G	L	N	S	E	N	A	L	S	N	E	A	M	E	R	G	W	Q	C	L	R	L	F	A	E	R	L	Q	D	I	P	P	S	Q	I	R	V	V
Query Conservation
Alig confidence																											.	.	.											.	.	.	.	.	.	.	.																											.	.
Template Conservation																											.	.	.											.	.	.	.	.	.	.	.																											.	.
Template Sequence		K	Q	H	N	V	V	A	G	V	D	X	G	A	T	H	I	R	F	C	L	R	T	A	E	G	.	.	.	E	T	L	H	C	E	K	K	R	T	.	.	.	.	.	.	.	.	A	E	V	I	A	P	G	L	V	S	G	I	G	E	X	I	D	E	Q	L	R	R	F	N	A	R	.	.	C	H	G	L	V	X
Template Known Secondary structure														S	S									T	T	S	.	.	.											.	.	.	.	.	.	.	.					T	T																		T			.	.
Template Predicted Secondary structure																											.	.	.											.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	A	T	L	R	L	A	V	N	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	A	K	A	Q	E	I	L	G	C	P	V	Q	V	I	S	G	E	E	E	A	R	L	I	Y	Q	G	V	A	H	T	T	G	G	A	D	Q	R	L	V	V	D	I	G	G	A	S	T	E	L	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																		.	.	.
Template Sequence		G	F	P	A	L	V	S	K	D	K	R	T	I	I	S	T	P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	C	P	V	E	F	S	R	D	V	N	.	.	.	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G	T	G	X	G	F	A
Template Known Secondary structure				S	S		B		T	T	S	S		B		S			S	S	S							T	T										T	S										.	.	.										T	T		T	T	S								S	S	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		T	G	T	G	A	Q	T	T	S	L	F	S	L	S	M	G	C	.	.	.	.	.	.	.	.	V	T	W	L	E	R	Y	F	A	D	R	N	L	G	Q	E	N	F	D	A	A	.	.	.	.	.	.	E	K	A	A	R	E	V	L	R	P	V	A	D	E	L	R	Y	H	G	W	K	V	C	V	G	A	S	G
Query Conservation																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	X	N	G	A	P	W	T	G	A	H	G	V	A	G	E	E	T	N	C	S	G	X	A	L	R	R	W	Y	E	Q	Q	P	R	N	Y	P	L	R	D	L	F	V	H	A	E	N	A	P	F	V	Q	S	L	L	E	N	A	A	R	A	I	A	T	S	I	N	L	F	D	P	D	A	V	I	L	G	G	G
Template Known Secondary structure					T	T						S	S	S							S	S	S									T	T	S			S	S		G	G	G						T	T																									S							T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		T	V	Q	A	L	Q	E	I	M	M	A	Q	G	M	D	E	R	I	T	L	E	K	L	Q	Q	L	K	Q	R	A	I	.	.	H	C	G	R	L	E	E	L	E	I	D	G	L	T	L	E	R	A	L	V	F	P	S	G	L	A	I	L	I	A	I	F
Query Conservation																																	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	X	D	.	.	.	.	.	.	.	.	.	.	.	X	P	A	F	P	R	E	T	L	V	A	X	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	S	D	F	N	G	A	Q	G	A	A	I	L	A	H	Q	R	F	L
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.	.	.	.	.	S	T	T													T	S		T	T	T	T	T	T	T										T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250												.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions