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Job DescriptionP25552
Confidence100.00%DateThu Jan 5 11:42:09 GMT 2012
Rank2Aligned Residues467
% Identity20%Templatec3hi0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  GSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRV
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Template Sequence  LTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRXHEEGVTRALXALRRFHVLSEQAQAQKLYV
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLS
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Template Sequence  LATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQPDG. IAGDLGGGSLELIDIKDKSCGEGITLP
Template Known Secondary structure 
GGGGG
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   90.........100.........110.........120.........130.........140. ........150.........160........
 
   162.......170.........180.........190.........200.........210.........220...... ...230....
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Query Sequence  MGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQG. . . . . . . MDERITLE
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Template Sequence  LGGLRLSEQSDGSL. . . . . . . EKAATIARKHVKSFAKLLAAGEGRTFYAVGGTWRNIAKLHXEISGYPLHXXQGYELPLE
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   169170.........180.. .......190.........200.........210.........220.........230.........240.
 
   235....240.........250.........260.........270.........280.........290.........300.. .......310...
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Query Sequence  KLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGMLHL. AVEQDIRSRTL
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Template Sequence  EXLNF. . . . . . . . . . . LEEVIVSRDNRRSLLPFGAIAXREVLRAXKPAKIAFSAQGVREGYLYSLLTEAERESDPLLVAA
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   242.... ...250.........260.........270.........280.........290.........300.........310
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  RNIQRRFMIDIDQAQRVAKVAANFFDQVENEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQ
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Template Sequence  DELAILRARSPEHARELADWSGRTFPVFGIDE. . TEEESRYRQAACLLADISWRAHPDYRGLQALNIIAHSSFVAITHPG
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   322.......330.........340.........350... ......360.........370.........380.........390.........
 
   394.....400.........410..... ....420.........430.........440.........450...... ...460.....
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Query Sequence  KKLLATLLLNQTNPVDLSSLHQ. . . . . QNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHE. . . LLTLTLPQG
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Template Sequence  RAYIALANYYRFEGLNDNGTTEPLAAXAGERLQELGKLLGGLLRVVYLFSASXP. GVVDHLKFRKSDNPDIDLEFVVPHD
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   400.........410.........420.........430.........440.........450... ......460.........470........
 
   466...470.........480....... ..490...
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Query Sequence  WLTQHPLGKEIIAQESQWQSYV. HWPLEV
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Template Sequence  YCD. . . FAGERLDGRLQQLAKLTGKRLAF
Template Known Secondary structure  GGG...G
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   479480. ........490.........500....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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