Job Description P25552 Confidence 99.69% Date Thu Jan 5 11:42:09 GMT 2012 Rank 13 Aligned Residues 272 % Identity 14% Template c3cj9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ectonucleoside triphosphate diphosphohydrolase 2; PDBTitle: structure of rattus norvegicus ntpdase2 in complex with2 calcium, amp and phosphate Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.																																													.	.
Query SS confidence																				.	.	.																																													.	.
Query Sequence		A	I	D	L	G	S	N	S	F	H	M	L	V	V	R	E	V	A	.	.	.	G	S	I	Q	T	L	T	R	I	K	R	K	V	R	L	A	A	G	L	N	S	E	N	A	L	S	N	E	A	M	E	R	G	W	Q	C	L	R	L	F	A	E	R	L	.	.	Q	D	I	P	P	S	Q	I	R	V	V	A	T
Query Conservation																				.	.	.																																													.	.
Alig confidence																				.	.	.																																													.	.
Template Conservation
Template Sequence		V	L	D	A	G	S	S	H	T	S	M	F	V	Y	K	W	P	A	D	K	E	N	D	T	G	I	V	G	Q	H	S	S	C	D	V	Q	G	G	G	I	S	S	Y	A	N	D	P	S	K	A	G	Q	S	L	V	R	C	L	E	Q	A	L	R	D	V	P	R	D	R	H	A	S	T	P	L	Y	L	G	A	T
Template Known Secondary structure							S	S											G	G	G	T	T	S	T	T											S	S	S		G	G	G	G	T	T		T						T	T											S		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		85	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.															.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	L	R	.	.	L	A	V	N	A	G	D	F	I	A	K	A	Q	E	I	L	G	C	.	.	.	.	.	.	.	.	.	P	V	Q	V	I	S	G	E	E	E	A	R	L	I	Y	Q	G	V	A	H	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	D	Q	R	L	V	V	D	I
Query Conservation						.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	M	R	L	L	N	L	T	S	P	E	A	T	A	R	V	L	E	A	V	T	Q	T	L	T	Q	Y	P	F	D	F	R	G	A	R	I	L	S	G	Q	D	E	G	V	F	G	W	V	T	A	N	Y	L	L	E	N	F	I	K	Y	G	W	V	G	R	W	I	R	P	R	K	G	T	L	G	A	M	D	L
Template Known Secondary structure																												T	S	S	S																									T	T	T	T	S					T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.																		.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	A	S	T	E	L	V	T	G	T	G	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	L	F	S	L	S	.	M	G	C	V	T	W	L	E	R	Y	F	A	D	R	N	L	G	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	A	S	T	Q	I	T	F	E	T	T	S	P	S	E	D	P	G	N	E	V	H	L	R	L	Y	G	Q	H	Y	R	V	Y	T	H	S	F	L	C	Y	G	R	D	Q	I	L	L	R	L	L	A	S	A	L	Q	I	H	R	F	H	P	C	W	P	K	G	Y	S	T	Q	V	L	L	Q	E	V	Y	Q	S
Template Known Secondary structure			S	S										S					G	G	G							T	T												T		S																T	S	S							T												S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
																		181	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	D	A	A	E	K	A	A	R	E	V	L	R	.	.	.	.	.	.	.	.	.	P	V	A	D	E	L	R	Y	H	G	W	K	V	C	V	G	A	S	G	T	V	Q	A	L	Q	E	I	M	M	A	Q	G	M	D	E	R	I	T	L	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																																.
Template Conservation																																																																								.
Template Sequence		P	C	T	M	G	Q	R	A	I	V	S	L	S	G	T	S	N	A	T	L	C	R	D	L	V	S	R	L	F	N	I	S	S	C	P	F	S	Q	C	S	F	N	G	V	F	Q	P	P	V	A	G	N	F	I	A	F	S	A	F	Y	Y	T	V	D	F	L	T	T	V	M	.	G	L	P	V	G	T	L	K	Q
Template Known Secondary structure		T	T	T	T	T																						T	T				S			S	S	S	S	B	S	S	T	T		B						S																		T	S	.					S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		L	Q	Q	L	K	Q	R	A	I	H	C	G	R	L	E	E	L	E	I	D	G	L	T	L	E	R	A	L	V	F	P	S	G	L	A	I	L	I	A	I	F	T	E	.	L	N	I	Q
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		L	E	E	A	T	E	I	T	C	N	Q	T	W	T	E	L	Q	A	R	V	P	G	Q	K	T	R	L	A	D	Y	C	A	V	A	M	F	I	H	Q	L	L	S	R	G	Y	H	F	D
Template Known Secondary structure																				T			S			T	T	G	G	G														T	T	S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions