Job Description P25552 Confidence 85.03% Date Thu Jan 5 11:42:09 GMT 2012 Rank 105 Aligned Residues 129 % Identity 14% Template c2r8qA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:class i phosphodiesterase pdeb1; PDBTitle: structure of lmjpdeb1 in complex with ibmx Resolution 1.50 Å

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		313	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	N	I	Q	R	R	F	M	I	D	I	.	.	.	.	D	Q	A	Q	R	V	A	K	V	A	A	N	F	F	D	Q	V	E	N	E	W	H	L	E	A	I	S	R	D	L	L	I	S	A	C	Q	L	H	E	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	Q	C	R	R	R	Y	R	R	V	P	Y	H	N	F	Y	H	V	V	D	V	C	Q	T	L	H	T	Y	L	Y	T	G	K	A	S	E	L	L	T	E	L	E	C	Y	V	L	L	V	T	A	L	V	H	D	L	D	H	M	G	V	N	N	S	F	Y	L	K	T	D	S	P	L	G	I	L	S	S	A	S
Template Known Secondary structure								T			S		S	S	S	S																	T	S		G	G	G	G	S															T	T	T	T			S									T	T
Template Predicted Secondary structure
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
					367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.														.
Predicted Secondary structure		.	.	.																				.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	V	D	F	K	Q	A	P	Q	H	A	A	Y	L	V	R	N	L	D	.	.	.	L	P	G	F	T	P	A	Q	K	K	L	L	A	T	L	L	L	N	Q	T	N	P	V	D	L	S	S	L	H	Q	Q	N	A	V	P	P	R	V	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation		.	.	.																				.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																				.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	N	S	V	L	E	V	H	H	C	S	L	A	I	E	I	L	S	D	P	A	A	D	V	F	E	G	L	S	G	Q	D	V	A	Y	A	Y	R	A	L	I	D	C	V	L	A	T	D	M	A	K	H	A	D	A	L	S	R	F	T	E	L	A	T	S	G	F	E	K	D	N	D	T	H	R	R	L	V	M
Template Known Secondary structure		S																		T	S	T	T	T		T	T	T	T	S																		T	T		G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	L	L	R	L	A	I	I	F	A	S	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	L	I	K	A	G	D	V	S	N	V	T	K
Template Known Secondary structure										T	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		828	.	830	.	.	.	.	.	.	.	.	.	840	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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