Job Description P25552 Confidence 33.57% Date Thu Jan 5 11:42:09 GMT 2012 Rank 180 Aligned Residues 127 % Identity 9% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	V	L	R	P	V	A	D	E	L	R	Y	H	G	W	K	V	C	V	G	A	S	G	T	V	Q	A	L	Q	E	I	M	M	A	Q	G	M	D	E	R	I	T	L	E	K	L	Q	Q	L	K	Q	R	A	I	H	C	G	R	L	E	E	L	E	I	D	G	L	T	L	E	R	A	L	V	F	P	S	G
Query Conservation
Alig confidence																																																													.	.											.	.	.	.	.
Template Conservation																																																													.	.											.	.	.	.	.
Template Sequence		F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	L	A	K	A	G	K	L	T	.	.	S	S	I	G	V	V	T	Y	Q	E	.	.	.	.	.	T	I	P	A
Template Known Secondary structure														T	T				S														T	T		S	S																			T	T		T	T	.	.	S								S	S	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.											.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.						.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	L	I	A	I	F	T	E	L	N	I	Q	C	M	T	L	A	G	G	A	L	R	E	G	L	V	Y	G	M	L	H	L	A	V	E	Q	D	I	R	S	R	T	L	R	N	I	Q	R	R	F	M	I	D
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	V	A	F	Q	K	T	F	.	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	G	A	G	L	I	T	D	L	A	E	E	A	G	M	T
Template Known Secondary structure										.	T									S	S														T	T							S										T	T	S
Template Predicted Secondary structure										.
Template SS confidence
		119	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions