Return to main results Retrieve Phyre Job Id

Job DescriptionP25552
Confidence100.00%DateThu Jan 5 11:42:09 GMT 2012
Rank1Aligned Residues487
% Identity38%Templatec2floA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  SLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATA
Query Conservation     











 
 
        
   
  



 
    
 

 


 
    
  
        
  
  



Alig confidence 















































































Template Conservation   
 











 
 
        
   
  



      
 

 
 
 
    
  
        
  
  



Template Sequence  QEFAAVDLGSNSFHXVIARVVDGAXQIIGRLKQRVHLADGLGPDNXLSEEAXTRGLNCLSLFAERLQGFSPASVCIVGTH
Template Known Secondary structure 

SSTT


GGGB
TTS
B
TTT

GGG
Template Predicted Secondary structure 

























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  TLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCV
Query Conservation 


 
 
   

  
   

  
 



 


 
 
 

          











            

 

 
Alig confidence 















































































Template Conservation 
 
 
 
   

  
   

  





 


 
 
 

          











            

 

 
Template Sequence  TLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFXGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRXGCV
Template Known Secondary structure 
TTTTT
SS


T



S

SS
TTS

Template Predicted Secondary structure 























Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   166...170.........180.........190.........200.........210.........220...... ...230.........240....
Predicted Secondary structure 














.





Query SS confidence 




























































.

















Query Sequence  TWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQG. MDERITLEKLQQLKQRAI
Query Conservation 

 
 
                 
   
               

 


   

       .    
    
  
   
 
Alig confidence 




























































.

















Template Conservation 

 
 
                 
   
                
 


   

            
    
      
 
Template Sequence  SFAQLYFPGGVINKENFQRARXAAAQKLETLTWQFRIQGWNVAXGASGTIKAAHEVLXEXGEKDGIITPERLEKLVKEVL
Template Known Secondary structure  SGGGB

TTTTT

SSTTT
TT

B
Template Predicted Secondary structure 



























Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  HCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDI
Query Conservation       
     

   


 
  
  

  
        
 

  






          
    
   
  

  
 
Alig confidence 















































































Template Conservation             

   


 
  
  

  
        
 

  






          
    
   

  
    
Template Sequence  RHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEXEGRFRHQDVRSRTASSLANQYHIDS
Template Known Secondary structure  T

BGGG


TT

TTT
S

S

TT

T

Template Predicted Secondary structure 






















Template SS confidence 















































































   251........260.........270.........280.........290.........300.........310.........320.........330
 
   325....330.........340....... ..350.........360.........370.........380.........390.........400..
Predicted Secondary structure 


..










Query SS confidence 






















. .






















































Query Sequence  DQAQRVAKVAANFFDQVENEWHL. . EAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLL
Query Conservation   

  
   
  


 
     
..      

  

 




  
     
 

 


  
 
 
 
  
   

 
 
Alig confidence 






















..






















































Template Conservation   

  
   
  


 
     
      
 

  

 




  
       

 


  
 
 


  
   

 


Template Sequence  EQARRVLDTTXQXYEQWREQQPKLAHPQLEALLRWAAXLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLXXATLVR
Template Known Secondary structure  STTT

TTGGGGT
STTS

TT

Template Predicted Secondary structure 

















Template SS confidence 















































































   331........340.........350.........360.........370.........380.........390.........400.........410
 
   403......410.........420.........430.........440....... ..450.........460.........470.........480
Predicted Secondary structure 























..






Query SS confidence 












































. .
































Query Sequence  NQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVP. . EMTLQANHELLTLTLPQGWLTQHPLGKEIIAQE
Query Conservation 


                  
  
  




  
   
      ..          
 
 
   
    

    
  
Alig confidence 







































.



..
































Template Conservation 

    
              
 

 





  

 
  .  
      
      
 
           

       
Template Sequence  YHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ. ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKE
Template Known Secondary structure  TSSS


GGGS


SSS
TTTTGG.G



S

TT
TTGGGS
Template Predicted Secondary structure 












.
















Template SS confidence 















































































   411........420.........430.........440.........450 .........460.........470.........480.........
 
   481...... ..490...
Predicted Secondary structure 
.

Query SS confidence 






.





Query Sequence  SQWQSYV. HWPLEV
Query Conservation         .   
  
Alig confidence 






.





Template Conservation     
  


  
 
Template Sequence  QEYWEGVAGWRLKI
Template Known Secondary structure  TSTT
Template Predicted Secondary structure 



Template SS confidence 













   490.........500...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions