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Job DescriptionP25552
Confidence100.00%DateThu Jan 5 11:42:09 GMT 2012
Rank5Aligned Residues289
% Identity23%Templatec1t6dB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:exopolyphosphatase; PDBTitle: miras phasing of the aquifex aeolicus ppx/gppa phosphatase: crystal2 structure of the type ii variant
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  SLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATA
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Template Sequence  XRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERXKAVATE
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SSSSSS

TTTTSS

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   910.........20.........30.........40.........50.........60.........70.........80........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  TLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCV
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Template Sequence  AIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVXVVDQGGGSTEYVFGKGYKVREVISLPIGIV
Template Known Secondary structure  TGGGSTT







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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   166...170.........180.........190.........200.........210.........220...... ...230........
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Query Sequence  TWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQG. . . . . . . MDERITLEKLQQ
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Template Sequence  NLTETFFKQDPPTEEEVKRFFEFLEKELSKVKK. . . . . PVDTIVGLGGTITTLAALEYNVYPYDPQKVHGKVLTYGQIKK
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SSS

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   169170.........180.........190.........200. ........210.........220.........230.........240...
 
   239240.........250... ......260.........270.........280.........290.........300
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Query Sequence  LKQRAIHCGRLEELE. IDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGML
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Template Sequence  WFDTFKEIPSEERSKRFRQVEDRRAKVILAGIGIFLKTLEIFE. KDLIVSDWGLREGVLVSEX
Template Known Secondary structure  TS

TTS
GGGTTTTT.


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   244.....250.........260.........270.........280...... ...290.........300.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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