Return to main results Retrieve Phyre Job Id

Job DescriptionP25552
Confidence97.76%DateThu Jan 5 11:42:09 GMT 2012
Rank29Aligned Residues154
% Identity12%Templatec1o1f4_
PDB info PDB header:contractile proteinChain: 4: PDB Molecule:skeletal muscle actin; PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle
Resolution70.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.. .......40.........50...... ...60......
Predicted Secondary structure 








...












....................
Query SS confidence 






















. . .























. . . . . . . . . . . . . . . . . . . .









Query Sequence  AIDLGSNSFHMLVVREVAGSIQT. . . LTRIKRKVRLAAGLNSENALSNEA. . . . . . . . . . . . . . . . . . . . MERGWQCLRL
Query Conservation 










 
 
        ...
   
  



 
    
 

 

....................
 
    
  
Alig confidence 






















...























....................









Template Conservation 


 

     
      
  



 
                   
              
   
 
   
     
  
Template Sequence  VCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHH
Template Known Secondary structure 
SSTT
SS
S

SS



TT



S
TTGGG
STT

Template Predicted Secondary structure 






























Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   67..70.........80.........90... ......100........ .110.........120.........130.........140....
Predicted Secondary structure 







.



.










Query SS confidence 


























.














.



































Query Sequence  FAERLQDIPPSQIRVVATATLRLAVNA. GDFIAKAQEILGCPV. QVISGEEEARLIYQGVAHTTGGADQRLVVDIGGAST
Query Conservation 
        
  
  






 
 
 .  

  
   

  
. 



 


 
 
 

          









Alig confidence 


























.














.












........














Template Conservation       
        



 
                
  
   
  
 

 


   ........
    



 
   
Template Sequence  TFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS. . . . . . . . GRTTGIVLDSGDGVT
Template Known Secondary structure  TTT


GGGS

TT

T

ST........S
SS
SS
Template Predicted Secondary structure 


















........






Template SS confidence 















































































   8990.........100.........110.........120.........130.........140..... ....150.........160
 
   145....150...... ...160.........170.
Predicted Secondary structure 

..

Query SS confidence 











. .














Query Sequence  ELVTGTGAQTTS. . LFSLSMGCVTWLERY
Query Conservation 

          ..  

 

 


 
 
Alig confidence 











..














Template Conservation   
  
  
            

  

  
Template Sequence  HNVPIYEGYALPHAIMRLDLAGRDLTDYL
Template Known Secondary structure  TT
GGG



Template Predicted Secondary structure 












Template SS confidence 




























   161........170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions