Job Description P25552 Confidence 97.80% Date Thu Jan 5 11:42:09 GMT 2012 Rank 27 Aligned Residues 166 % Identity 17% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	S	T	S	S	L	Y	A	A	I	D	L	G	S	N	S	F	H	M	L	V	V	R	E	V	.	.	.	.	.	A	G	S	I	Q	T	L	T	R	I	K	R	K	V	R	L	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	E	N	A	L	S	N	E	A	M	E
Query Conservation																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		M	L	R	K	D	.	.	.	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V	A	L
Template Known Secondary structure				S			.	.	.							S	S							T	T	T								S						T	T	T							S					T	T	T	T	S			T	T									T	T			S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		1	.	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	W	Q	C	L	R	L	F	A	E	R	L	Q	D	I	P	P	S	Q	I	R	V	V	A	T	A	T	L	R	L	A	V	N	A	G	D	F	I	A	K	A	Q	E	I	L	G	C	P	V	Q	V	I	S	G	E	E	E	A	R	L	I	Y	Q	G	V	A	H	T	T	G	G	A	D	Q	R	L	V	V	D
Query Conservation
Alig confidence								.	.																																																											.	.
Template Conservation								.	.																																																											.	.
Template Sequence		V	M	L	R	Y	F	.	.	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	L	.	.	N	V	E	E	P	S	G	N	M	V	V	D
Template Known Secondary structure								.	.						T	S			S	S										S	S															T	T	T		S														T	T	T		.	.		S	S	S	S	S
Template Predicted Secondary structure								.	.																																																											.	.
Template SS confidence
		78	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	A	S	T	E	L	V	T	G	T	G	A	Q	T	T	S	L	F	S	L	S	M	G	C	V	T	W	L	E	R	Y	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	G	G	T	T	E	V	A	V	I	S	L	G	S	I	V	T	W	E	S	I	R	I	A	G	D	E	M	D	E	A	I	V	Q
Template Known Secondary structure				S	S									T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions