Return to main results Retrieve Phyre Job Id

Job DescriptionP25552
Confidence97.29%DateThu Jan 5 11:42:09 GMT 2012
Rank40Aligned Residues260
% Identity18%Templatec1hpmA_
PDB info PDB header:hydrolase (acting on acid anhydrides)Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30... ......40.........50...
Predicted Secondary structure 








.............












.......................
Query SS confidence 























. . . . . . . . . . . . .



















. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  AIDLGSNSFHMLVVREVAGSIQTL. . . . . . . . . . . . . TRIKRKVRLAAGLNSENALS. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 










 
 
        
.............   
  



 
    
 

.......................
Alig confidence 














..






.............



















.......................
Template Conservation 


 


   

   ..      
    
    

 
         
  
               
  
           
Template Sequence  GIDLGTTYSCVGVFQ. . HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQS
Template Known Secondary structure 

SS..TT


TTS
SS


SS
TTTTTT
GGG

GGGTTT

TT
Template Predicted Secondary structure 


..





















Template SS confidence 















































































   8.10.........20.. .......30.........40.........50.........60.........70.........80.....
 
   54.....60.........70.........80.........90.........100..
Predicted Secondary structure  ...............................







Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
Query Conservation  ............................... 


 
    
  
        
  
  






 
 
   

  
  
Alig confidence  ...............................

































..












Template Conservation                                  

    
  
                  

   ..       
  
  
Template Sequence  DMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF. . NDSQRQATKDAGT
Template Known Secondary structure  TT
SSTTTT
TS



TT
..
Template Predicted Secondary structure 























..
Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150 .........160...
 
   103......110.........120.........130.........140.........150... ......160.........170....
Predicted Secondary structure 
















.....



...
Query SS confidence 


















































. . . . .




















. . .
Query Sequence  ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQ. . . . . TTSLFSLSMGCVTWLERYFAD. . .
Query Conservation   

  
 



 


 
 
 

          











       .....     

 

 


 
 
   ...
Alig confidence 


















































.....




















...
Template Conservation           
 
  
                 



 
   
                       
   

  
      
Template Sequence  IAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA
Template Known Secondary structure  TT
TTTTS

SS

SS
TTTT
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   175....180.........190.........200.........210.........220.........230.........240.........
Predicted Secondary structure  .....





















Query SS confidence  . . . . .










































































Query Sequence  . . . . . RNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLKQRAIHCGRL
Query Conservation  .....              
   
               

 


   

           
    
  
   
      
Alig confidence  .....







































........


















........
Template Conservation                          
  
            
    ........        
    
  
  ........
Template Sequence  EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLY. . . . . . . . EGIDFYTSITRARFEELNA. . . . . . . .
Template Known Secondary structure  S


TT
TTTSS........TT........
Template Predicted Secondary structure 
















........



........
Template SS confidence 















































































   244.....250.........260.........270.........280........ .290.........300.......
 
   250.........260.........270.........280 .........290.........300..
Predicted Secondary structure 






.....






Query SS confidence 






























. . . . .





















Query Sequence  EELEIDGLTLERALVFPSGLAILIAIFTELN. . . . . IQCMTLAGGALREGLVYGMLHL
Query Conservation 
     

   


 
  
  

  
     .....   
 

  






      
Alig confidence  .............

















.....





















Template Conservation  .............     
   
   
         
  





 
    
   
  
Template Sequence  . . . . . . . . . . . . . DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQD
Template Known Secondary structure  .............TT

GGG

SGGGG
Template Predicted Secondary structure  .............











Template SS confidence 

























































   308.310.........320.........330.........340.........350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions