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Job DescriptionP0A7V0
Confidence95.77%DateThu Jan 5 11:06:16 GMT 2012
Rank14Aligned Residues148
% Identity19%Templatec3shoA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50. ........60.........70.........80.........90.........100.........110.........120
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Query Sequence  NLEKTVPMFN. EALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ
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Template Sequence  NLNQTLNQTQPEAIEAAVEAI. RADHVIVVGXGFSA. AVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANL. . . . . . . . .
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   111........120.........130. ........140..... ....150.........160.........170.........
 
   121........130.........140.........150.........160......... 170.........180.........190.. ..
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Query Sequence  SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHE. . . . HIAIKEANNLGIPVFAIVDTNSD. . PD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RPTDLXIGVSVWRYLRDTVAALAGAAERGVPTXALTDSSVSPPAR
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   181........190.........200.........210.........220.....
 
   195....200.........210. ........220.........230.....
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Query Sequence  GVDFVIPGNDDAIRAVT. . . . . . LYLGAVAATVREGRSQDLASQAEE
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Template Sequence  IADHVLVAATRGVGHSLSPVGLIAVVNLLLAEIAVREPERALAVLRE
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   226...230.........240.........250.........260.........270..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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