 |
Job Description | P0A7V0 | Confidence | 25.21% | Date | Thu Jan 5 11:06:16 GMT 2012 |
Rank | 90 | Aligned Residues | 66 |
% Identity | 9% | Template | c3o1hB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:periplasmic protein tort; |
PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao
|
Resolution | 3.10 Å |
|
 |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | G | G | L | P | D | A | L | F | V | . |
. |
I | D | A | D | H | E | H | I | A | I | K | E | A | N | N | L | G | I | P | V | F | A | I | V | D | T | N | S | D | P | D | G | V | D | F | V | I | P | . |
G | N | D | D | A | I | R | A | V | T | L | Y | L | G | A | V | A | A |
Query Conservation |   |
|   |   |
|
|
|   |
|
|
| . | . |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|
| . |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | Q | W | G | A | N | A | I | I | L | G | T | V | D | P | H | A | Y | E | H | N | L | K | S | W | V | G | N | T | P | V | F | A | T | V | N | Q | L | D | L | D | E | E | Q | S | T | L | L | K | G | E | V | G | V | D | W | Y | W | M | G | Y | E | A | G | K | Y | L | A | E |
Template Known Secondary structure |   |
 |  | T | T |
| S |  |  |  |  |
|
| S | S | T | T | T | T | T | T | T | T |  |  |  |  | T | T |
|
|  |  |  |
| S | S |
|
|
|
|
| T | T | T | T | T | S |  |  |  |  |  |
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|