|   |
42 | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
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| . |
. |
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|
| . |
. |
. |
|
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|
Query Sequence |   |
N | L | E | K | T | V | P | M | F | . |
. |
N | E | A | L | A | E | L | N | K | I | A | S | R | K | G | K | I | L | F | V | G | T | K | R | A | A | S | . |
. |
E | A | V | K | D | A | A | L | S | C | D | Q | F | F | V | N | H | R | . |
. |
. |
W | L | G | G | M | L | T | N | W | K | T | V | R | Q | S | I | K | R | L |
Query Conservation |   |
|
|   |   |
|   |   |   |
| . | . |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |   | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
| . | . | . |
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
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|
| . | . |
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|
|
| . | . | . |
|
|
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|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
A | I | S | R | L | P | E | V | T | S | E | E | A | L | V | K | T | V | E | K | I | A | E | C | T | G | K | I | V | V | A | G | C | G | T | S | G | V | A | A | K | K | L | V | H | S | F | N | C | I | E | R | P | A | V | F | L | T | P | S | D | A | V | H | G | T | L | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  | T |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|  |  |  |  | T | T | T | G | G | G | G | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
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  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
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|
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
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|
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|
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|
|
| . |
. |
. |
. |
|
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|
|
Query Sequence |   |
K | D | L | E | T | Q | S | Q | D | G | T | F | D | K | L | T | K | K | E | A | L | M | R | T | R | E | L | E | K | L | E | N | S | L | G | G | I | K | D | M | G | G | L | P | D | A | L | F | V | I | D | A | D | H | E | . |
. |
. |
. |
H | I | A | I | K | E | A | N | N | L | G | I | P | V | F | A | I | V | D | T | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |   |   |   | . | . | . | . |   |   |
|
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . |
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|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | K | E | D | I | L | I | L | I | S | K | G | G | N | T | G | E | L | L | N | L | I | P | A | C | K | T | K | G | S | T | L | I | G | V | T | E | N | P |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  |
| S | S | S |
|
|  |  |  |  | T | T |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S |
| T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
|
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|
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|
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|
|
|
|
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|
|
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
  |   |
191 | . | . | . | |
|
. | . | . | . | . | 200 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . |
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
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|
|
|
|
|
Query Sequence |   |
S | D | P | D | . |
. |
G | V | D | F | V | I | P | G | N | D | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | I | R | A | V | T | L | Y | L | G | A | V | A | A | T | V | R | E | G | R | S | Q | D | L | A | S | Q | A | E |
Query Conservation |   |
  |
|
|   | . | . |   |
|
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
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|
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|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
D | S | V | I | A | K | E | A | D | I | F | F | P | V | S | V | S | K | E | P | D | P | F | N | X | L | A | T | A | S | T | X | A | V | I | A | S | F | D | A | V | I | V | C | L | X | T | Y | X | N | Y | T | K | E | Q | F | S | V |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |
| S |  |  |  |  |
|
|
| S |
|
|
| S | T | T | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |