Job Description P0A7V0 Confidence 100.00% Date Thu Jan 5 11:06:16 GMT 2012 Rank 7 Aligned Residues 187 % Identity 29% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		S	M	R	D	M	L	K	A	G	V	H	F	G	H	Q	T	R	Y	W	N	P	K	M	K	P	F	I	F	G	A	R	.	N	K	V	H	I	I	N	L	E	K	T	V	P	M	F	N	E	A	L	A	E	L	N	K	I	A	S	R	K	G	K	I	L	F	V	G	T	K	R	A	A	S	E	A	V	K	D	A
Query Conservation																																	.
Alig confidence																.	.																.
Template Conservation																.	.
Template Sequence		D	I	K	R	L	L	A	S	N	C	H	Q	A	T	.	.	I	N	L	N	N	Q	M	K	R	Y	I	S	H	K	G	V	N	G	I	H	Y	I	N	I	E	E	T	W	Q	K	I	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	R	I	Y	G	Q	R	A	A	I	K	F	A
Template Known Secondary structure									T	T	T	T				.	.	S				G	G	G	T	T	T						S	S	S																								S	S	G	G	G							S
Template Predicted Secondary structure																.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	S	C	D	Q	F	F	V	N	H	R	W	L	G	G	M	L	T	N	W	K	T	V	R	Q	S	I	K	R	L	K	D	L	E	T	Q	S	Q	D	G	T	F	D	K	L	T	K	K	E	A	L	M	R	T	R	E	L	E	K	L	E	N	S	L	G	G	I	K	D	M	G	G	L	P	D	A	L	F	V
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	T	H	C	K	S	T	S	S	S	R	W	T	P	G	T	L	T	N	Y	Q	T	L	K	Y	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	V	L	I	V
Template Known Secondary structure					T		B					S	S			T	T	T	T	T		T	T		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																																															.	.	.	.	.	120
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	D	H	E	H	I	A	I	K	E	A	N	N	L	G	I	P	V	F	A	I	V	D	T	N	S	D	P	D	G	V	D	F	V	I	P	G	N	D	D	A	I	R	A	V	T	L	Y	L	G	A	V	A	A	T	V	R	E	G	R	S	Q	D	L	A	S	Q	A	E	E	S	F	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	P	R	S	D	F	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	C	D	S	D	S	P	L	A	Y	V	D	V	V	I	P	C	N	N	R	S	T	E	S	I	S	M	I	Y	W	M	I	A	R	E	V	K	I	L	R	G	E	L	S	K	D	E	E	W	E	V	M	V	D
Template Known Secondary structure		S		T	T	T	T								T	T	T	T									S	S	S			T	T							S			S	S																				T	S	S		S	S	S				S		G	G
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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