Job Description P0A7V0 Confidence 100.00% Date Thu Jan 5 11:06:16 GMT 2012 Rank 10 Aligned Residues 181 % Identity 29% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		R	D	M	L	K	A	G	V	H	F	G	H	Q	T	R	Y	W	N	P	K	M	K	P	F	I	F	G	A	R	.	N	K	V	H	I	I	N	L	E	K	T	V	P	M	F	N	E	A	L	A	E	L	N	K	I	A	S	R	K	G	K	I	L	F	V	G	T	K	R	A	A	S	E	A	V	K	D	A	A	L
Query Conservation																															.
Alig confidence																.	.														.																												.
Template Conservation																.	.																																										.
Template Sequence		Q	L	L	L	A	A	N	T	H	L	G	A	R	N	.	.	V	Q	V	H	Q	E	P	Y	V	F	N	A	R	P	D	G	V	H	V	I	N	V	G	K	T	W	E	K	L	V	L	A	A	R	I	I	A	A	I	P	N	.	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A
Template Known Secondary structure				S	G	G	G	G	T	S	S			S	S	.	.			G	G	G	G	G	G						G	G	G																							T	T	T	.	T									S
Template Predicted Secondary structure																.	.																																										.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	D	Q	F	F	V	N	H	R	W	L	G	G	M	L	T	N	W	K	T	V	R	Q	S	I	K	R	L	K	D	L	E	T	Q	S	Q	D	G	T	F	D	K	L	T	K	K	E	A	L	M	R	T	R	E	L	E	K	L	E	N	S	L	G	G	I	K	D	M	G	G	L	P	D	A	L	F	V	I	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	F	K	E	P	R	L	V	I	V	T	D
Template Known Secondary structure		T	S	S						S				T	T	T	T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S				S					S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																																															.	.	.	.	.	.	.	.	120	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	H	E	H	I	A	I	K	E	A	N	N	L	G	I	P	V	F	A	I	V	D	T	N	S	D	P	D	G	V	D	F	V	I	P	G	N	D	D	A	I	R	A	V	T	L	Y	L	G	A	V	A	A	T	V	R	E	G	R	S	Q	D	L	A	S	Q	A	E	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	S	D	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	E	F	V	D	V	A	I	P	C	N	N	R	G	K	H	S	I	G	L	I	W	Y	L	L	A	R	E	V	L	R	L	R	G	A	L	V	D	R	T	Q	P	W	S
Template Known Secondary structure		T	T	T	T											T									T	T	S		G	G	G		S					S		S	S																					T							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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