 |
| Job Description | P11864 | | Confidence | 3.54% | Date | Thu Jan 5 11:32:51 GMT 2012 |
| Rank | 51 | Aligned Residues | 31 |
| % Identity | 26% | Template | c4a1dE_ |
| PDB info |
PDB header:ribosome | Chain: E: PDB Molecule:rpl6; |
PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4.
|
| Resolution | 3.52 Å |
|
| | |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | |  | | | | | |  |
|
|
|
|
| | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | R | R | L | N | V | I | F | S | C | G | T | G | D | I | V | D | L | S | S | L | D | L | R | N | V | D | L | D | Y | Y |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
| |
| |
| | |
| |
| |
|
|
| Template Sequence | |
L | K | R | V | N | Q | A | Y | T | L | S | T | S | T | K | V | D | L | T | G | V | N | T | A | K | F | E | D | D | Y | F |
| Template Known Secondary structure | |
S | | | |
| G | G | G | | | | | | | |
|
|
| T | T |
|
| G | G | G |
|
| G | G | G | S |
| Template Predicted Secondary structure | |
| | | |
| | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
