Return to main results Retrieve Phyre Job Id

Job DescriptionP11864
Confidence8.22%DateThu Jan 5 11:32:51 GMT 2012
Rank16Aligned Residues48
% Identity23%Templatec3n90A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:thylakoid lumenal 15 kda protein 1, chloroplastic; PDBTitle: the 1.7 angstrom resolution crystal structure of at2g44920, a2 pentapeptide repeat protein from arabidopsis thaliana thylakoid3 lumen.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190........
Predicted Secondary structure 



























Query SS confidence 















































Query Sequence  VDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNF
Query Conservation 















































Alig confidence 















































Template Conservation 



 
 
  
 
  
    
 
                         
Template Sequence  QDLSGKDFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTGADL
Template Known Secondary structure 
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
TT
B
Template Predicted Secondary structure 












































Template SS confidence 















































   96...100.........110.........120.........130.........140...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions