 |
Job Description | P11864 | Confidence | 4.48% | Date | Thu Jan 5 11:32:51 GMT 2012 |
Rank | 34 | Aligned Residues | 29 |
% Identity | 21% | Template | c3g5pB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:peptide deformylase, mitochondrial; |
PDBTitle: structure and activity of human mitochondrial peptide deformylase, a2 novel cancer target
|
Resolution | 1.70 Å |
|
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Y | L | L | K | I | T | P | V | L | I | S | I | S | D | M | Y | S | E | E | K | I | K | F | V | E | S | C | L | N | E | P | G |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|   |   | . | . | . | . |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
Template Sequence |   |
P | L | R | V | F | V | N | P | S | L | R | V | . |
. |
. |
. |
L | D | S | R | L | V | T | F | P | E | G | C | E | S | V | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|