Job Description P11864 Confidence 2.25% Date Thu Jan 5 11:32:51 GMT 2012 Rank 100 Aligned Residues 58 % Identity 26% Template c3fvcA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:glycoprotein gp110; PDBTitle: crystal structure of a trimeric variant of the epstein-barr virus2 glycoprotein b Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		F	S	C	G	T	G	D	I	V	D	L	S	S	L	D	L	R	N	V	D	L	D	Y	Y	D	F	T	D	K	H	M	A	N	T	I	L	N	P	F	K	L	.	.	.	.	.	.	.	.	N	S	T	N	F	T	N	A	N	M	F	Q	V	N	F	V	S	S	T	Q	N	A	T	I	S	W	D
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.																				.
Template Conservation																.	.	.	.	.	.	.	.	.																																														.
Template Sequence		F	V	T	T	T	G	Q	T	V	E	M	S	P	F	.	.	.	.	.	.	.	.	.	Y	D	G	K	N	K	E	T	F	H	E	R	A	D	S	F	H	V	R	T	N	Y	K	I	V	D	Y	D	N	R	G	T	N	P	Q	G	E	R	R	A	F	L	D	K	G	.	T	Y	T	L	S	W	K
Template Known Secondary structure					T	T	S				S	B		T	T	.	.	.	.	.	.	.	.	.			T	T		S	S		B		S		T	T	T												G	G	G	T	T														S	.	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.										.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions