Return to main results Retrieve Phyre Job Id

Job DescriptionP11864
Confidence7.80%DateThu Jan 5 11:32:51 GMT 2012
Rank18Aligned Residues65
% Identity15%Templatec2w7zB_
PDB info PDB header:inhibitorChain: B: PDB Molecule:pentapeptide repeat family protein; PDBTitle: structure of the pentapeptide repeat protein efsqnr, a dna2 gyrase inhibitor. free amines modified by cyclic3 pentylation with glutaraldehyde.
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 


































Query SS confidence 
































































Query Sequence  RLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSST
Query Conservation 
































































Alig confidence 
































































Template Conservation   
  
      
        
         
    
    
    
       
      
    
Template Sequence  QLPLLTNCQLEDEAILENHLYQQIDLPNQEVRNLVFRDAVFDHLSLANGQFASFDCSNVRFEACD
Template Known Secondary structure 


S




TT
SS

S
B
SS

TT
B
TT
S
B
Template Predicted Secondary structure 














































Template SS confidence 
































































   14.....20.........30.........40.........50.........60.........70........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions