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| Job Description | P11864 | | Confidence | 2.51% | Date | Thu Jan 5 11:32:51 GMT 2012 |
| Rank | 86 | Aligned Residues | 24 |
| % Identity | 29% | Template | c2aivA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; |
PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p
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| Resolution | UNK |
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141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
| Predicted Secondary structure | |
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| Query Sequence | |
V | I | F | S | C | G | T | G | D | I | V | D | L | S | S | L | D | L | R | N | V | D | L | D |
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| Template Conservation | |
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| Template Sequence | |
V | V | G | H | K | S | Y | G | K | I | E | F | L | E | P | V | D | L | A | G | I | P | L | T |
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| Template Predicted Secondary structure | |
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| Template SS confidence | |
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30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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