Job Description P11864 Confidence 3.16% Date Thu Jan 5 11:32:51 GMT 2012 Rank 61 Aligned Residues 32 % Identity 34% Template c1y4mC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2) Resolution 1.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.
Predicted Secondary structure																.	.											.	.	.	.	.	.	.
Query SS confidence																.	.											.	.	.	.	.	.	.
Query Sequence		N	L	E	A	L	A	P	G	I	E	K	L	K	Q	.	.	T	S	I	E	M	V	T	L	L	N	.	.	.	.	.	.	.	T	L	Q	P	G	G	K	C
Query Conservation																.	.											.	.	.	.	.	.	.
Alig confidence																.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	D	T	M	A	K	A	L	T	T	M	Q	E	Q	I	D	S	L	A	A	V	V	L	Q	N	R	R	G	L	D	M	L	T	A	A	Q	G	G	I	C
Template Known Secondary structure					S	S																													T	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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