Return to main results Retrieve Phyre Job Id

Job DescriptionP11864
Confidence2.31%DateThu Jan 5 11:32:51 GMT 2012
Rank97Aligned Residues24
% Identity33%Templatec1ko6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:nuclear pore complex protein nup98; PDBTitle: crystal structure of c-terminal autoproteolytic domain of2 nucleoporin nup98
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160....
Predicted Secondary structure 















Query SS confidence 























Query Sequence  VIFSCGTGDIVDLSSLDLRNVDLD
Query Conservation 























Alig confidence 























Template Conservation   


 


 
 
  



  
 

Template Sequence  TIGRKGYGSIYFEGDVNLTNLNLD
Template Known Secondary structure  TTT
S

TT
B
Template Predicted Secondary structure 











Template SS confidence 























   749750.........760.........770..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions