Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0S1
Confidence74.18%DateThu Jan 5 11:29:58 GMT 2012
Rank10Aligned Residues40
% Identity18%Templated2do3a1
SCOP infoSH3-like barrel Translation proteins SH3-like domain SPT5 KOW domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130........ .140........ .150.........160.....
Predicted Secondary structure 







.....

.




Query SS confidence 












. . . . .









.
















Query Sequence  MFRPFRAGEYVDL. . . . . GGVAGTVLSV. QIFSTTMRTADGKIIVI
Query Conservation      
 


 
 
.....    
 
  
.    
 
    
  
 
Alig confidence 












.....









.
















Template Conservation 


 
  






 
   






 
    
 
 

 
  

 
Template Sequence  LRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKV
Template Known Secondary structure 

SS

TT
SSSTTTT

SS
SSS
S
Template Predicted Secondary structure 


















Template SS confidence 













































   468.470.........480.........490.........500.........510...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions