Job Description P0C0S1 Confidence 73.86% Date Thu Jan 5 11:29:58 GMT 2012 Rank 11 Aligned Residues 38 % Identity 24% Template c2zkrt_ PDB info PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		129	130	.	.	.	.	.	.	.	.						.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.					.														.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.					.														.	.	.	.	.	.	.
Query Sequence		P	F	R	A	G	E	Y	V	D	L	.	.	.	.	.	G	G	V	A	.	G	T	V	L	S	V	Q	I	F	S	T	T	M	.	.	.	.	.	.	.	R	T	A	D	G	K	I	I	V	I	P
Query Conservation												.	.	.	.	.					.														.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.					.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	R	K	D	D	E	V	Q	V	V	R	G	H	Y	K	G	Q	Q	I	G	K	V	V	Q	V	Y	R	K	K	Y	V	I	Y	I	E	R	V	Q	R	E	K	A	N	G	T	T	V	H	V	G
Template Known Secondary structure		B			T	T							S	S	T	T	T	T			S								T	T	T	T					T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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