 |
Job Description | P0C0S1 | Confidence | 22.71% | Date | Thu Jan 5 11:29:58 GMT 2012 |
Rank | 60 | Aligned Residues | 37 |
% Identity | 19% | Template | c2xhcA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription antitermination protein nusg; |
PDBTitle: crystal structure of thermotoga maritima n-utilization substance g2 (nusg)
|
Resolution | 2.45 Å |
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 140 | . | . | . | . | . | . | . | . | . | |
|
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | R | A | G | E | Y | V | D | L | . |
. |
. |
. |
. |
G | G | V | A | G | T | V | L | S | V | Q | . |
. |
. |
I | F | S | T | T | M | R | T | A | D | G | K | I | I | V | I |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |
| . | . | . | . | . |   |   |   |   |
|   |
|   |   |
|   | . | . | . |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
G | F | K | V | G | D | M | V | K | I | I | S | G | P | F | E | D | F | A | G | V | I | K | E | I | D | P | E | R | Q | E | L | K | V | N | V | T | I | F | G | R | E | T | P | V |
Template Known Secondary structure |   |
|
|
| T | T |
|  |  |  |  |
| S | S | T | T | T | T |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|