Job Description P0C0S1 Confidence 23.19% Date Thu Jan 5 11:29:58 GMT 2012 Rank 58 Aligned Residues 62 % Identity 15% Template c2k4kA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:general stress protein 13; PDBTitle: solution structure of gsp13 from bacillus subtilis Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	R	P	F	R	A	G	E	Y	V	D	L	G	G	V	A	G	T	V	L	S	V	Q	I	F	S	T	T	M	R	T	A	D	G	K	I	I	V	I	P	N	G	K	I	I	A	G	N	I	I	N	F	S	R	E	P	V	R	R	N	E	F	I	I	G	V
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		M	A	A	K	F	E	V	G	S	V	Y	T	.	.	.	.	.	G	K	V	T	G	L	Q	A	Y	G	A	F	V	A	L	D	E	E	T	Q	G	L	V	H	I	S	E	V	T	H	G	F	V	K	D	I	N	E	H	L	S	V	G	D	E	V	Q	V	K	V
Template Known Secondary structure								T	T					.	.	.	.	.								T	T								T	T							G	G	G	T	S	S	S			S		G	G	G	T			T	T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions