Return to main results Retrieve Phyre Job Id

Job DescriptionP33669
Confidence12.87%DateThu Jan 5 11:52:38 GMT 2012
Rank2Aligned Residues27
% Identity33%Templated1qhda2
SCOP infoViral protein domain Viral protein domain Top domain of virus capsid protein
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950......... 60.........70.....
Predicted Secondary structure 






..



Query SS confidence 










. .















Query Sequence  IPENDGVFTWL. . PDFFPHVAVDISIYTN
Query Conservation 


  

 


..
 


  
 

 
  
Alig confidence 










..















Template Conservation 
      


 



 
      


  
Template Sequence  ITSADGATTWYFNPVILRPNNVEIEFLLN
Template Known Secondary structure 
TTSS




T
Template Predicted Secondary structure 







Template SS confidence 




























   238.240.........250.........260......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions