Job Description P05719 Confidence 99.93% Date Thu Jan 5 10:58:51 GMT 2012 Rank 5 Aligned Residues 198 % Identity 22% Template d1yf2a2 SCOP info DNA methylase specificity domain DNA methylase specificity domain Type I restriction modification DNA specificity domain Resolution 2.40

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.																.	.
Query SS confidence																																																				.	.	.																.	.
Query Sequence		G	K	L	P	E	G	W	V	I	A	P	V	S	T	V	T	T	L	I	R	G	V	T	Y	K	K	E	Q	A	I	N	Y	L	K	D	D	Y	L	P	L	I	R	A	N	N	I	Q	N	G	K	.	.	.	F	D	T	T	D	L	V	F	V	P	K	N	L	V	K	.	.	E	S	Q	K	I	S	P	E	D	I
Query Conservation																																																				.	.	.																.	.
Alig confidence																														.																						.	.	.																.	.
Template Conservation																														.
Template Sequence		G	E	I	P	E	D	W	E	V	F	E	I	K	D	I	F	E	V	K	T	G	T	T	P	S	T	K	K	.	S	E	Y	W	E	N	G	E	I	N	W	I	T	P	L	D	L	S	R	L	N	E	K	I	Y	I	G	S	S	E	R	K	V	T	K	I	A	L	E	K	C	N	L	N	L	I	P	K	G	S	I
Template Known Secondary structure			S			T	T																				T	T		.	G	G	G	T	T	T													T	T	T	T		S						S	S										T	T				B		T	T
Template Predicted Secondary structure																														.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	M	S	S	G	S	K	S	V	V	G	K	S	A	H	Q	H	L	P	F	E	C	S	F	G	A	F	C	G	V	L	R	P	E	K	L	I	F	S	G	F	I	A	H	F	T	K	S	S	L	Y	R	N	K	I	S	S	L	S	A	G	A	N	I	N	N	I	K	P	A	S	F	D	L	I	N	I	P
Query Conservation
Alig confidence									.	.	.	.																																								.	.
Template Conservation									.	.	.	.																																								.	.
Template Sequence		I	I	S	T	R	A	P	.	.	.	.	V	G	Y	V	A	V	L	T	V	E	S	T	F	N	Q	G	C	K	G	L	F	Q	K	N	N	D	S	V	N	T	E	F	Y	A	Y	Y	L	K	F	.	.	K	K	N	L	L	E	N	L	S	G	G	S	T	F	K	E	L	S	K	S	M	L	E	N	F	K	I	P
Template Known Secondary structure						S	S	S	.	.	.	.	T	T						S	S		B				T	T							S		T	T	S													.	.	T										S	S	S	S
Template Predicted Secondary structure									.	.	.	.																																								.	.
Template SS confidence
		301	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	P	L	A	E	Q	K	I	I	A	E	K	L	D	T	L	L	A	Q	V	D	S	T	K	A	R	F	E	Q	I	P	Q	I	L	K	R	F	R	Q	A	V	L	G	G	A	V	N	G	K	L	T	E	K
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		L	P	P	L	E	E	Q	K	Q	I	A	K	I	L	S	S	V	D	K	S	I	E	L	.	.	.	.	K	K	Q	K	K	E	K	L	Q	R	M	K	K	K	I	M	E	L	L	L	T	G	K	V	R	V	K
Template Known Secondary structure																									.	.	.	.																				T	T	T	S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.					.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions