Job Description P05719 Confidence 99.92% Date Thu Jan 5 10:58:51 GMT 2012 Rank 6 Aligned Residues 200 % Identity 21% Template d1yf2a1 SCOP info DNA methylase specificity domain DNA methylase specificity domain Type I restriction modification DNA specificity domain Resolution 2.40

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		G	K	L	P	E	G	W	V	I	A	P	V	S	T	V	T	T	L	I	R	G	V	T	Y	K	K	E	Q	A	I	N	Y	L	K	D	D	Y	L	P	L	I	R	A	N	N	I	Q	N	G	K	F	D	T	T	D	.	.	L	V	F	V	P	K	N	L	V	K	E	S	Q	K	I	S	P	E	D	I	V	I	A
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		G	E	I	P	E	D	W	E	I	V	E	L	K	D	V	C	K	K	I	K	A	G	G	T	P	K	T	S	V	E	E	Y	Y	K	N	G	T	I	P	F	V	K	I	E	D	I	T	N	S	N	K	Y	L	T	N	T	K	I	K	I	T	E	E	G	L	N	N	S	N	A	W	I	V	P	K	N	S	V	L	F
Template Known Secondary structure		S	S		B	S	S																					T	T		G	G	G	T	T	T													T	S	S	S						S										T	S	S				B		T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	G	S	K	S	V	V	G	K	S	A	H	Q	H	L	P	F	E	C	S	F	G	A	F	C	G	V	L	R	P	E	K	L	I	F	S	G	F	I	A	H	F	T	K	S	S	L	Y	R	N	K	I	S	S	L	S	A	G	A	N	I	N	N	I	K	P	A	S	F	D	L	I	N	I	P	I	P	P
Query Conservation
Alig confidence														.	.	.	.																																	.	.
Template Conservation														.	.	.	.																																	.	.
Template Sequence		A	M	Y	G	S	I	G	E	T	A	I	N	.	.	.	.	K	I	E	V	A	T	N	Q	A	I	L	G	I	I	P	K	D	N	I	L	E	S	E	F	L	Y	Y	I	L	A	K	N	.	.	K	N	Y	Y	S	K	L	G	M	Q	T	T	Q	K	N	L	N	A	Q	I	V	K	S	F	K	I	P	L	P	P
Template Known Secondary structure				S	S	S	T	T						.	.	.	.	S	S		B				S	S								T	T	T													T	.	.								S	S	S	S	S											T
Template Predicted Secondary structure														.	.	.	.																																	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	Q	K	I	I	A	E	K	L	D	T	L	L	A	Q	V	D	S	T	K	A	R	F	E	Q	I	P	Q	I	L	K	R	F	R	Q	A	V	L	G	G	A	V	N	G	K	L	T	E	K	W
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		L	E	E	Q	K	Q	I	A	K	I	L	T	K	I	D	E	G	I	E	I	.	.	.	.	I	E	K	S	I	N	K	L	E	R	I	K	K	G	L	M	H	K	L	L	T	K	G	I	G	H	S	R
Template Known Secondary structure																						.	.	.	.																								S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions