Job Description P05719 Confidence 99.86% Date Thu Jan 5 10:58:51 GMT 2012 Rank 7 Aligned Residues 176 % Identity 14% Template d1ydxa2 SCOP info DNA methylase specificity domain DNA methylase specificity domain Type I restriction modification DNA specificity domain Resolution 2.30

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	G	W	V	I	A	P	V	S	T	V	T	T	L	I	R	G	V	T	Y	K	K	E	Q	A	I	N	Y	L	K	D	D	Y	L	P	L	I	R	A	N	N	I	Q	N	G	K	F	D	T	T	D	L	V	F	V	P	K	N	L	V	K	E	S	Q	K	I	S	P	E	D	I	V	I	A	M	S	S	G
Query Conservation
Alig confidence																										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	S	Q	X	H	E	I	T	L	G	E	I	F	N	F	K	S	G	K	Y	L	K	S	.	.	.	E	E	R	L	E	E	G	K	F	P	Y	Y	G	A	G	I	D	N	T	G	F	V	A	E	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	K	D	T	I	S	I	I	S	N	G	Y
Template Known Secondary structure											G	G	G	T											G	.	.	.	G	G		B	S	S		S					S	S	S	S	S		S	S			S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S							S	S	T
Template Predicted Secondary structure																										.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.															.	.	.	250	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		S	K	S	V	V	G	K	S	A	H	Q	H	L	P	F	E	C	S	F	G	A	F	C	G	V	L	R	P	E	K	L	I	F	S	G	F	I	A	H	F	T	K	S	S	L	Y	R	N	K	I	S	S	L	S	A	G	A	N	I	N	N	I	K	P	A	S	F	D	L	I	N	I	P	I	.	P	P	L	A	E
Query Conservation																																																																												.
Alig confidence										.	.	.	.																															.	.																															.
Template Conservation										.	.	.	.																															.	.
Template Sequence		S	L	G	N	I	R	Y	H	.	.	.	.	E	I	P	W	F	N	G	T	G	S	I	A	L	E	P	X	N	N	E	I	Y	V	P	F	F	Y	C	A	L	K	.	.	Y	L	Q	K	D	I	K	E	R	X	K	S	D	D	S	P	F	L	S	L	K	L	A	G	E	I	K	V	P	Y	V	K	S	F	Q	L
Template Known Secondary structure		T	T	T						.	.	.	.	S	S		B				T	T							S	S	T	T												.	.														T	S										T							S
Template Predicted Secondary structure										.	.	.	.																															.	.
Template SS confidence
		260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	I	I	A	E	K	L	D	T	L	L	A	Q	V	D	S	T	K	A	R	F	E	Q	I	P	Q	I	L	K	R	F	R	Q	A	V	L	G	G	A	V	N	G	K
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		Q	R	K	A	G	K	I	V	F	L	L	D	Q	K	L	D	Q	.	.	.	.	Y	K	K	E	L	S	S	L	T	V	I	R	D	T	L	L	K	K	L	F	P	D	X
Template Known Secondary structure																			.	.	.	.																				S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions