Job Description P05719 Confidence 32.53% Date Thu Jan 5 10:58:51 GMT 2012 Rank 38 Aligned Residues 50 % Identity 20% Template c1y1yS_ PDB info PDB header:transferase/transcription/dna-rna hybrid Chain: S: PDB Molecule:transcription elongation factor s-ii; PDBTitle: rna polymerase ii-tfiis-dna/rna complex Resolution 4.00 Å

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		400	.	.	.	.	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		N	N	A	L	A	R	V	N	N	L	T	.	.	.	.	Q	S	I	L	A	K	A	F	R	G	E	L	T	A	Q	W	R	A	E	N	P	D	L	I	S	G	E	N	S	A	A	A	L	L	E	K	I	K	A	E	R	A	A
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		A	R	Y	R	I	I	Y	S	N	V	I	S	K	N	N	P	D	L	K	H	K	I	A	N	G	D	I	T	P	E	.	.	.	.	F	L	A	T	C	D	A	K	D	L	A	P	A	P	L	K	Q	K	I	E	E	I	A	K
Template Known Secondary structure											T	T	S	S						G	G	G	T	T			T					.	.	.	.	T	T	T	S	S		S	T	T	T	S	S	S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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