Return to main results Retrieve Phyre Job Id

Job DescriptionP75976
Confidence21.61%DateThu Jan 5 12:16:47 GMT 2012
Rank100Aligned Residues43
% Identity7%Templatec3katA_
PDB info PDB header:apoptosisChain: A: PDB Molecule:nacht, lrr and pyd domains-containing protein 1; PDBTitle: crystal structure of the card domain of the human nlrp12 protein, northeast structural genomics consortium target3 hr3486e
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130...... ...140.........150.........
Predicted Secondary structure 




......
Query SS confidence 



















. . . . . .






















Query Sequence  IRSAIEDGVVEPHEKTAIND. . . . . . ELYLSISKLQEHAALVYKIFCIS
Query Conservation 
 








  
   
 
......
   


  
             
Alig confidence 



















......






















Template Conservation 


 
   


    
 
    
   
   


 
  

  

  
  
Template Sequence  VLDKLHGQVLSQEQYERVLAENTRPSQXRKLFSLSQSWDRKCKDGLYQA
Template Known Secondary structure  TTTTS


SGGGG

TT
Template Predicted Secondary structure 









Template SS confidence 
















































   13991400.........1410.........1420.........1430.........1440.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions