|   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | D | V | L | F | N | F | N | K | A | T | L | K | P | E | G | Q | A | A | L | D | Q | L | Y | S | Q | L | S | N | L | D | P | K | D | G | S | V | V | V | L | G | Y | T | D | R | I | G | S | D | A | Y | N | Q | G | L | S | E | R | R | A | Q | S | V | V | D | Y | L | I | S | K | G | I | P | A | D | K | I | S | A |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   | . | . |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
N | N | I | V | Y | F | D | L | D | K | Y | D | I | R | S | D | F | A | Q | M | L | D | A | H | A | N | F | L | R | S | . |
. |
N | P | S | Y | K | V | T | V | E | G | H | A | D | E | R | G | T | P | E | Y | N | I | S | L | G | E | R | R | A | N | A | V | K | M | Y | L | Q | G | K | G | V | S | A | D | Q | I | S | I |
Template Known Secondary structure |   |
|
|  |  |  |
|
| T | T |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
| T | T |
|
|  |  |  |  |  |
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | M | G | E | S | N | P | V | T | G | N | T | C | D | N | V | K | Q | R | A | A | L | I | D | C | L | A | P | D | R | R | V | E | I | E |
Query Conservation |   |
  |
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
V | S | Y | G | K | E | K | P | A | V | L | G | H | D | E | A | A | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | K | N | R | R | A | V | L | V |
Template Known Secondary structure |   |
 |  |
| T | T | S | S |
| S | S |
| S | S | S |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . |
  |