Return to main results Retrieve Phyre Job Id

Job DescriptionP0A910
Confidence89.09%DateThu Jan 5 11:09:07 GMT 2012
Rank40Aligned Residues135
% Identity10%Templated1t16a_
SCOP infoTransmembrane beta-barrels Porins Outer membrane protein transport protein
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90 .........100..
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Query Sequence  YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVEN. . . . . . GAYKAQGVQLTA
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Template Sequence  YIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNL
Template Known Secondary structure  B
TTS
B

B


S


SSS

B


TT
TTGGG
S
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   51........60.........70.........80.........90.........100.........110.........120.........130
 
   103......110.........120.........130.. .......140.....
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Query Sequence  KLGYPITDDLDIYTRLGGMVWRADTKSNVY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GKNHDTGVSPVFA
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Template Conservation 
 
      



 
                                                            
    
Template Sequence  SGAYRLNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWN
Template Known Secondary structure 

SSS

SSGGGGS

TT
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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   146...150.........160...
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Query Sequence  GGVEYAITPEIATRLEYQ
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Template Sequence  AGILYELDKNNRYALTYR
Template Known Secondary structure  TT
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   211........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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