Return to main results Retrieve Phyre Job Id

Job DescriptionP0A910
Confidence99.93%DateThu Jan 5 11:09:07 GMT 2012
Rank12Aligned Residues108
% Identity30%Templatec3oonA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210.........220.........230.........240.........250.........260.........270.........280....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  APAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDY
Query Conservation                  
 
   

 
       
  

  
     
   
 
 
 


 

   
  

  

 

   
Alig confidence 










































..


































Template Conservation   
 
      
     
 
   
  
       
  

  
  .. 
   
 
 
 

  
    
  

  

  
   
Template Sequence  AIEVEKNNKGINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEK. . FKKNNILIEGHTEQFGLEEEXHELSEKRARAIGNY
Template Known Secondary structure 

TTB
TTS

B
GGG..S
S




S


Template Predicted Secondary structure 







..








Template SS confidence 















































































   1........10.........20.........30.........40... ......50.........60.........70........
 
   285....290 .........300.........310.........320.........330....
Predicted Secondary structure 


.























Query SS confidence 





.











































Query Sequence  LISKGI. PADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
Query Conservation 
   

.   

   
 

  
 
 
 
  

         
 




  
Alig confidence 





.













....................









Template Conservation 
   

    

   
 

  ....................  





 
Template Sequence  LIKXKVKDKDQILFKGWGSQK. . . . . . . . . . . . . . . . . . . . AKNRRVEITI
Template Known Secondary structure  TTSS
GGG
TT

....................

Template Predicted Secondary structure 









....................



Template SS confidence 


















































   7980.........90......... 100.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions