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Job DescriptionP0A910
Confidence99.78%DateThu Jan 5 11:09:07 GMT 2012
Rank18Aligned Residues137
% Identity99%Templatec3nb3C_
PDB info PDB header:virusChain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components
Resolution19.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  APKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLT
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Template Sequence  APKDNTWYTGAKLGWSQH. . . . . . . . . . . . . ENKLGAGAFGGYQVNPYVGFEMGYDWLG. . . . . . . RMPYAYKAQGVQLT
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   1........10........ .20.........30.........40...... ...50.........60
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  AKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNG
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Template Sequence  AKLGYPITDDLDIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN. . . . . . . . . . . . . . G
Template Known Secondary structure  SSSS
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   81........90.........100.........110.........120.........130.........140..... .
 
   182.......190..
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Query Sequence  MLSLGVSYRFG
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Template Sequence  MLSLGVSYRFG
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   161........170.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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