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Job DescriptionP0A910
Confidence99.97%DateThu Jan 5 11:09:07 GMT 2012
Rank7Aligned Residues126
% Identity33%Templatec2k1sA_
PDB info PDB header:lipoproteinChain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  VAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQ
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Template Sequence  RGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEY. . PKTAVNVIGYTDSTGGHDLNMRLSQQRAD
Template Known Secondary structure  TTTS
TTBSSSSS
B

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   280.........290.........300.........310.........320.........330......
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Query Sequence  SVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKG
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Template Sequence  SVASALITQGVDASRIRTQGLGPANPIASNSTAEGK. . . . . . . . . AQNRRVEITLSP
Template Known Secondary structure  T

GGG
TTT

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   93......100.........110.........120........ .130.........140
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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