Job Description P0A910 Confidence 99.66% Date Thu Jan 5 11:09:07 GMT 2012 Rank 23 Aligned Residues 148 % Identity 76% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	K	G	S	V	E	N	G	A	Y	K	A	Q	G	V	Q	L	T	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	Y	S	.	.	.	.	.	.	.	.	.	.	.	R	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	.	.	.	.	.	.	.	P	R	K	A	Q	G	V	Q	L	T	A	K	L
Template Known Secondary structure				S	S												T	T		.	.	.	.	.	.	.	.	.	.	.		S	S													S	S	S												S	S	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.												20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																	.	.	.																		.	.	.	.
Query SS confidence																																	.	.	.																		.	.	.	.
Query Sequence		K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	K	S	N	V	Y	G	.	.	.	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	.	.	.	.	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	N	I	G	D	A	H	T	I	G
Query Conservation																																	.	.	.																		.	.	.	.
Alig confidence																																	.	.	.																		.	.	.	.																				.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	Y	P	K	L	G	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	N	A	S	.	.	.	.	.	.
Template Known Secondary structure					T	T		T	T	T													S	S	B						S	S	S						B																S	S	S		S	S	S											S	S	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	G	E	A	A
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	G	E	A	A
Template Known Secondary structure		.	.	.													S		S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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