|   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | S | E | I | A | S | A | L | S | R | L | L | L | L | E | V | L | H | A | R | R | T | T | G | L | Q | L | P | D | R | I | V | S | V | P | L | W | Q | R | R | H | W | R | R | G | F | N | Q | S | D | L | L | C | Q | P | L | S | R | W | L | H | C | Q | W | D | S | E | A | V | T | R | T | R | A | T | A | T | Q | H |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |
|   | . | . |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
G | K | P | S | V | L | S | K | V | G | K | L | F | A | S | V | F | . |
. |
. |
. |
. |
. |
. |
A | E | R | E | I | D | V | V | M | T | V | A | T | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | P | L | A | Y | A | A | A | S | Y | L | N | V | P | V | V | I | . |
. |
V | R | K | D | G | S | T | V | S | I | N |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | T | T | S |
|
| S |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . | . |  | B |
|
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
. | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | S | A | R | L | R | K | R | N | L | K | N | A | F | R | L | E | L | P | V | Q | G | R | H | M | V | I | V | D | D | V | V | T | T | G | S | T | V | A | E | I | A | Q | L | L | L | R | N | G | A | A | A | V | Q | V | W | C | L |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|   |
Template Sequence |   |
Y | V | S | G | S | S | N | R | I | Q | . |
T | M | S | L | A | K | R | S | M | K | T | G | S | N | V | L | I | I | D | D | F | M | K | A | G | G | T | I | N | G | M | I | N | L | L | D | E | F | N | A | N | V | A | G | I | G | V | L |
Template Known Secondary structure |   |
 |  |
| S | S |
|
| S |  |  | . |  |  |  |  |  | G | G | G | S |
| T | T |
|  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T | G | G | G | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |