 |
Job Description | P46846 | Confidence | 28.76% | Date | Thu Jan 5 12:04:19 GMT 2012 |
Rank | 222 | Aligned Residues | 75 |
% Identity | 8% | Template | c3ej6D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:catalase-3; |
PDBTitle: neurospora crassa catalase-3 crystal structure
|
Resolution | 2.30 Å |
|
 |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | L | C | Q | P | L | S | R | W | L | H | C | Q | W | D | S | E | A | V | T | R | T | R | A | T | A | T | Q | H | F | L | S | A | R | L | R | K | R | N | L | K | N | A | F | R | L | E | L | P | V | Q | G | R | H | M | V | I | V | . |
. |
D | D | V | V | T | T | G | S | T | V | A | E | I | A | Q | L | L | L | R |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
| . | . |
|
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|   |   |
|
|
|   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|   |   |
|
| . |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
N | D | V | A | K | R | V | A | V | A | L | G | L | E | A | . |
P | Q | P | D | P | T | Y | Y | H | N | N | V | T | R | G | V | S | I | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | S | L | P | T | I | A | T | L | R | V | G | V | L | S | T | T | K | G | . |
G | S | L | D | K | A | K | A | L | K | E | Q | L | E | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|
|
| . |
|
|
|
| T | T | S |
|
|
|
|
|
| S | S |
|
| S | T | T | . | . | . | . | . | . | . | . | . | S |
|
| S |
|
| T | T |
|  |  |  |  |  |
|
| S | S | S | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | |
. | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . |
  |
  |   |
213 | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | A | A | A | V | Q | V |
Query Conservation |   |
  |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|
|
Template Sequence |   |
D | G | L | K | V | T | V | I |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
595 | . | . | . | . | 600 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|