 |
Job Description | P46846 | Confidence | 38.47% | Date | Thu Jan 5 12:04:19 GMT 2012 |
Rank | 154 | Aligned Residues | 44 |
% Identity | 23% | Template | c2yurA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:retinoblastoma-binding protein 6; |
PDBTitle: solution structure of the ring finger of human2 retinoblastoma-binding protein 6
|
Resolution | UNK |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | W | L | C | R | M | P | L | A | L | G | . |
. |
. |
. |
. |
. |
H | W | G | I | C | S | V | C | S | R | A | T | . |
. |
R | T | D | K | T | L | C | P | Q | C | G | L | P | A | T | H | S | H | L | P |
Query Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |
| . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
L | C | L | I | C | K | D | I | M | T | D | A | V | V | I | P | C | C | G | N | S | Y | C | D | E | C | I | R | T | A | L | L | E | S | D | E | H | T | C | P | T | C | H | Q | N | D | V | S | P | D | A | L |
Template Known Secondary structure |   |
S |
| S | S | S |
|
|
|
| T | T |
|  |  |
| S | S | S |
|
|  |  |
| T | T |  |  |  |  |  |  |  |  | S | S | S | S |
|
| S | S | S |
|
| S | S |
|
| T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|