Return to main results Retrieve Phyre Job Id

Job DescriptionP46846
Confidence83.33%DateThu Jan 5 12:04:19 GMT 2012
Rank72Aligned Residues43
% Identity21%Templatec2ko5A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:ring finger protein z; PDBTitle: nmr solution structure of lfv-z
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.. .......20.........30.........40.......
Predicted Secondary structure 







....




























Query SS confidence 







. . . .


































Query Sequence  PGLCWLCR. . . . MPLALGHWGICSVCSRATRTDKTLCPQCGLPATHS
Query Conservation 
  
  

....         

  
   
      
  
       
Alig confidence 







....


































Template Conservation 
 






  
 

 
 





 

 


  
  
 

  



 
Template Sequence  PQFCKSCWFENKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK
Template Known Secondary structure 




SS
S

SS
SS
T
SSSSTTTT



Template Predicted Secondary structure 
























Template SS confidence 














































   28.30.........40.........50.........60.........70....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions