Job Description P46846 Confidence 98.93% Date Thu Jan 5 12:04:19 GMT 2012 Rank 42 Aligned Residues 92 % Identity 21% Template c2c4kD_ PDB info PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) Resolution 2.65 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	V	L	H	A	R	R	T	T	G	L	Q	L	P	D	R	I	V	S	V	P	L	W	Q	R	R	H	W	R	R	G	F	N	Q	S	D	L	L	C	Q	P	L	S	R	W	L	H	C	Q	W	D	S	E	A	V	T	R	T	R	A	T	A	T	Q	H	F	L	S	A	R	L	R	K	R	N	L	K	N
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	F	L	L	Q	Y	I	Q	E	E	I	P	N	Y	R	N	A	V	I	V	A	K	S	P	D	A	A	K	R	.	.	.	.	.	.	.	.	.	.	A	Q	S	Y	A	E	R	L	R	L	G	L	A	V	.	.	I	H	P	P	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	T	T	G	G	G						S	S	G	G	G				.	.	.	.	.	.	.	.	.	.									T						.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.															.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	R	L	E	L	P	V	Q	G	R	H	M	V	I	V	D	D	V	V	T	T	G	S	T	V	A	E	I	A	Q	L	L	L	R	N	G	A	A	A	V	Q	V	W	C
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	V	G	D	V	G	G	R	I	A	I	I	V	D	D	I	I	D	D	V	E	S	F	V	A	A	A	E	I	L	K	E	R	G	A	Y	K	I	Y	V	M	A
Template Known Secondary structure		.	.	.			S			T	T								S			S	S	T												T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions